Mod:Hunt Research Group/from chemdraw
Jump to navigation
Jump to search
Starting from Chemdraw
- in chemdraw first clean up the structure in chemdraw, Structure:Clean up structure
- in chemdraw export as a MDLmol file file.mol
- in gaussview choose open file
- set file type to MDO MOL Files
- set open-as to gaussian input file
- open options button and select Add Hydrogens: Ask
- then click open, it will look funny, don't panic
- first thing to do is Edit:clean
- then manipulate the atoms to reasonable possitions
- clean again
- keep repeating this process until you have a good structure
- run a HF/3-21G optimisation to obtain a starting structure