Brickluci
Comments
It's great that you have a working wiki—you did a good job. However, your answers could have been elaborated more thoroughly. Also, it would have been nice if you had focused a bit more on enhancing the visual appeal of the wiki. If you have any queries or want more detailed feedback on your computational lab, please contact Prof. Hunt.
NH3 Molecule
Calculation Data
| name of submitted log file | LKB_NH3_OPTF_POP.log |
| molecule | NH3 |
| method | RB3LYP |
| basis set | 6-31G(d,p) |
| final energy | -56.557769 |
| RMS gradient | 0.0000002 |
| point group | C3V |
Convergence
Item Table:
Item Value Threshold Converged? Maximum Force 0.000000 0.000015 YES RMS Force 0.000000 0.000010 YES Maximum Displacement 0.000003 0.000060 YES RMS Displacement 0.000001 0.000040 YES
Low Frequencies:
Low frequencies --- -5.6864 -3.6131 -3.6124 0.0017 0.0048 0.0162 Low frequencies --- 1089.3674 1693.9284 1693.9284
Optimised Molecule
Jmol Rotatable Molecule
Logfile: Media:LKB NH3 OPTF POP.LOG
Optimised NH3 Molecule
Important geometric parameters
Optimised bond distance and angle for NH3
| coord | value |
| r(N-H) | 1.02Â |
| θ(H-N-H) | 106° |
Vibrations
Table:
| Mode | 1 | 2 | 3 | 4 | 5 | 6 |
|---|---|---|---|---|---|---|
| Wavenumber (cm-1) | 1089 | 1694 | 1694 | 3461 | 3590 | 3590 |
| Symmetry | A1 | E | E | A1 | E | E |
| Intensity | 145 | 14 | 14 | 1 | 0 | 0 |
Charges
NBO charges image, colour coded red (negative) to green (positive):
The charge range is ±1.125e
![]()
Table of NH3 charges:
| Atom | Charge |
|---|---|
| N | -1.13 |
| H | +0.38 |
Project Molecule:N2F2
Calculation Data
| name of submitted log file | LKB_N2F2_OPTF_POP.log |
| molecule | N2F2 |
| method | RB3LYP |
| basis set | 6-31G(d,p) |
| final energy | -309.01241 |
| RMS gradient | 0.0000003 |
| point group | C2V |
Convergence
Item Table
Item Value Threshold Converged? Maximum Force 0.000001 0.000015 YES RMS Force 0.000000 0.000010 YES Maximum Displacement 0.000001 0.000060 YES RMS Displacement 0.000001 0.000040 YES
Low Frequencies
Low frequencies --- -0.0015 -0.0012 -0.0010 3.2225 4.3532 5.1001 Low frequencies --- 347.8772 561.2472 771.6105
Optimised Molecule
Jmol Rotatable Molecule
Logfile: Media:LKB N2F2 OPTF POP.LOG
Optimised N2F2 Molecule
Important geometric parameters
Optimised bond distances and angles for N2F2
| coord | value |
| r(N-F) | 1.39Â |
| r(F-F) | 1.22Â |
| θ(F-N-N) | 114° |
| θ(F-N-N-F) | 0° |
Vibrations
Table
| Mode | 1 | 2 | 3 | 4 | 5 | 6 |
|---|---|---|---|---|---|---|
| Wavenumber (cm-1) | 348 | 561 | 772 | 949 | 987 | 1637 |
| Symmetry | A1 | A2 | B2 | A1 | B2 | A1 |
| Intensity | 1 | 0 | 75 | 75 | 81 | 21 |
Questions:
- how many modes do you expect from the 3N-6 rule?
- 6, because there are 4 atoms, and 3(4)-6 = 6
- why are there only 4 peaks in the IR spectrum?
- Even though there are 6 modes, only 4 of them have a high enough intensity to appear in the spectrum.
- which vibration is the asymmetric N-F stretch?
- Mode 3
- what is the nature of the highest energy vibration?
- The highest energy vibration is mode 6, which is the N-N stretch
Charges
NBO charges image, colour coded red (negative) to green (positive):
The charge range is ±0.215e
![]()
Table of N2F2 charges:
| Atom | Charge |
|---|---|
| N | -0.22 |
| F | +0.22 |
Molecular Orbitals
- which MOs are core orbital MOs?
- MOs 1-4 are the core orbitals, which don't take part in bonding.
| Real MO | LCAO MO |
|---|---|