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It's great that you have a working wiki—you did a good job. However, your answers could have been elaborated more thoroughly. Also, it would have been nice if you had focused a bit more on enhancing the visual appeal of the wiki. If you have any queries or want more detailed feedback on your computational lab, please contact Prof. Hunt.

NH3 Molecule

Calculation Data

name of submitted log file LKB_NH3_OPTF_POP.log
molecule NH3
method RB3LYP
basis set 6-31G(d,p)
final energy -56.557769
RMS gradient 0.0000002
point group C3V

Convergence

Item Table:

         Item               Value     Threshold  Converged?
 Maximum Force            0.000000     0.000015     YES
 RMS     Force            0.000000     0.000010     YES
 Maximum Displacement     0.000003     0.000060     YES
 RMS     Displacement     0.000001     0.000040     YES

Low Frequencies:

 Low frequencies ---   -5.6864   -3.6131   -3.6124    0.0017    0.0048    0.0162
 Low frequencies --- 1089.3674 1693.9284 1693.9284

Optimised Molecule

Static Image
Lkb nh3 optf.png


Jmol Rotatable Molecule
Logfile: Media:LKB NH3 OPTF POP.LOG

Optimised NH3 Molecule

Important geometric parameters

Optimised bond distance and angle for NH3

coord value
r(N-H) 1.02Â
θ(H-N-H) 106°

Vibrations

Table:

Mode 1 2 3 4 5 6
Wavenumber (cm-1) 1089 1694 1694 3461 3590 3590
Symmetry A1 E E A1 E E
Intensity 145 14 14 1 0 0

Computed IR Spectrum:
Lkb nh3 optf IR.png

Charges

NBO charges image, colour coded red (negative) to green (positive):
The charge range is ±1.125e
Lkb nh3 optf charge.png

Lkb nh3 optf range.png

Table of NH3 charges:

Atom Charge
N -1.13
H +0.38

Project Molecule:N2F2

Calculation Data

name of submitted log file LKB_N2F2_OPTF_POP.log
molecule N2F2
method RB3LYP
basis set 6-31G(d,p)
final energy -309.01241
RMS gradient 0.0000003
point group C2V

Convergence

Item Table

       Item               Value     Threshold  Converged?
 Maximum Force            0.000001     0.000015     YES
 RMS     Force            0.000000     0.000010     YES
 Maximum Displacement     0.000001     0.000060     YES
 RMS     Displacement     0.000001     0.000040     YES

Low Frequencies

Low frequencies ---   -0.0015   -0.0012   -0.0010    3.2225    4.3532    5.1001
 Low frequencies ---  347.8772  561.2472  771.6105

Optimised Molecule

Static Image
LKB N2H2 OPTF.png


Jmol Rotatable Molecule
Logfile: Media:LKB N2F2 OPTF POP.LOG

Optimised N2F2 Molecule

Important geometric parameters

Optimised bond distances and angles for N2F2

coord value
r(N-F) 1.39Â
r(F-F) 1.22Â
θ(F-N-N) 114°
θ(F-N-N-F)

Vibrations

Table

Mode 1 2 3 4 5 6
Wavenumber (cm-1) 348 561 772 949 987 1637
Symmetry A1 A2 B2 A1 B2 A1
Intensity 1 0 75 75 81 21

Computed IR Spectrum:
LKB N2F2 OPTF IR.png

Questions:

  • how many modes do you expect from the 3N-6 rule?
6, because there are 4 atoms, and 3(4)-6 = 6
  • why are there only 4 peaks in the IR spectrum?
Even though there are 6 modes, only 4 of them have a high enough intensity to appear in the spectrum.
  • which vibration is the asymmetric N-F stretch?
Mode 3
  • what is the nature of the highest energy vibration?
The highest energy vibration is mode 6, which is the N-N stretch

Charges

NBO charges image, colour coded red (negative) to green (positive):
The charge range is ±0.215e
LKB N2F2 OPTF CHARGES.png

LKB N2F2 OPTF RANGE.png

Table of N2F2 charges:

Atom Charge
N -0.22
F +0.22

Molecular Orbitals

  • which MOs are core orbital MOs?
MOs 1-4 are the core orbitals, which don't take part in bonding.
Real MO LCAO MO
LKB N2F2 OPTF ORBITALS.png LKB N2F2 OPTF LCAO.png